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https://dspace.iiti.ac.in/handle/123456789/3928
Title: | G-quadruplex stabilization in the ions and maltose transporters gene inhibit Salmonella enterica growth and virulence |
Authors: | Jain, Neha Mishra, Subodh Kumar Shankar, Uma Jaiswal, Ankit Kodgire, Prashant Kumar, Amit |
Keywords: | guanine quadruplex;maltose;ABC transporter;bacterial protein;guanine quadruplex;MalK protein, Bacteria;maltose binding protein;Article;bacterial gene;bacterial genome;bacterial growth;bacterial virulence;bioassay;bioinformatics;controlled study;DNA sequence;entA gene;malE gene;malK gene;mgtA gene;nonhuman;polymerase chain reaction;priority journal;promoter region;reverse transcription polymerase chain reaction;Salmonella enterica;genetics;ion transport;pathogenicity;virulence;ATP-Binding Cassette Transporters;Bacterial Proteins;G-Quadruplexes;Ion Transport;Maltose-Binding Proteins;Promoter Regions, Genetic;Salmonella enterica;Virulence |
Issue Date: | 2020 |
Publisher: | Academic Press Inc. |
Citation: | Jain, N., Mishra, S. K., Shankar, U., Jaiswal, A., Sharma, T. K., Kodgire, P., & Kumar, A. (2020). G-quadruplex stabilization in the ions and maltose transporters gene inhibit salmonella enterica growth and virulence. Genomics, 112(6), 4863-4874. doi:10.1016/j.ygeno.2020.09.010 |
Abstract: | The G-quadruplex structure is a highly conserved drug target for preventing infection of several human pathogens. We tried to explore G-quadruplex forming motifs as promising drug targets in the genome of Salmonella enterica that causes enteric fever in humans. Herein, we report three highly conserved G-quadruplex motifs (SE-PGQ-1, 2, and 3) in the genome of Salmonella enterica. Bioinformatics analysis inferred the presence of SE-PGQ-1 in the regulatory region of mgtA, SE-PGQ-2 in ORF of entA, and SE-PGQ-3 in the promoter region of malE and malK genes. The G-quadruplex forming sequences were confirmed by biophysical and biomolecular techniques. Cellular studies affirm the inhibitory effect of G-quadruplex specific ligands on Salmonella enterica growth. Further, PCR inhibition, reporter based assay, and RT-qPCR assays emphasize the biological relevance of G-quadruplexes in these genes. Thus, this study confirmed the presence of G-quadruplex motifs in Salmonella enterica and characterized them as a promising drug target. © 2020 Elsevier Inc. |
URI: | https://doi.org/10.1016/j.ygeno.2020.09.010 https://dspace.iiti.ac.in/handle/123456789/3928 |
ISSN: | 0888-7543 |
Type of Material: | Journal Article |
Appears in Collections: | Department of Biosciences and Biomedical Engineering |
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